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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs13209880 chr6:99472084 T/G 1.79E-5 489 15.32 19.17 25.13 KM Plot
THCA rs13210820 chr6:99333787 C/T 2.17E-5 489 15.63 18.77 25.13 KM Plot
THCA rs13217201 chr6:99319629 C/T 1.98E-5 490 15.63 18.45 25.13 KM Plot
THCA rs13222235 chr7:64299586 G/T 9.99E-16 490 16.37 14.03 17.32 KM Plot
THCA rs13222669 chr7:64299277 C/T 9.99E-16 489 16.37 14.23 17.32 KM Plot
THCA rs13253502 chr8:42442018 G/A 0.000171 478 15.42 15.9 17.83 KM Plot
THCA rs13262608 chr8:52431830 G/A 2.62E-6 487 14.93 18.23 18.13 KM Plot
THCA rs13280051 chr8:8231691 C/T 3.93E-6 490 10.72 16.65 15.93 KM Plot
THCA rs13298336 chr9:132294141 A/G 0 488 16.13 15.08 9.57 KM Plot
THCA rs13306604 chr16:20793129 A/T 4.8E-5 490 16.37 14.67 17.47 KM Plot
THCA rs13310502 chr7:29828596 T/C 9.46E-5 482 16.2 15.17 12.83 KM Plot
THCA rs13314125 chr3:52115398 C/T 8.21E-5 483 16.02 14.9 17.72 KM Plot
THCA rs13324457 chr3:127687788 G/T 0 487 16.37 14.93 6.03 KM Plot
THCA rs13338613 chr16:20887751 T/C 9.13E-5 490 16.33 14.75 17.65 KM Plot
THCA rs1337902 chr1:45952066 G/A 3.5E-5 489 10.13 16.07 16.92 KM Plot